Sixty-Four Free Chemistry Databases Part 19: Grokking Molecular Symmetry with Symmetry@Otterbein

If you've ever had trouble visualizing molecular symmetry and finding point groups - or explaining them to others, today's stop on our continuing tour of free chemistry databases and Web services is for you. Symmetry@Otterbein (S@O) is dedicated to teaching molecular symmetry using an interactive, 3D approach.

S@O is organized around around three concepts:

  • Interactive Tutorial Explains in plain English and with reference to interactive 3D models the elements of symmetry. Each element can be animated onto a given structure viewed from any vantage point.
  • Gallery Let S@O show you the symmetry elements of dozens of molecules. Each can be rotated, zoomed, and panned.
  • Challenge Think you know symmetry? Take a test that uses the same 3D interactive approach as in the tutorials and gallery.

S@O makes especially good use of animation. For example, in addition to simply overlaying symmetry elements such as mirror planes, each symmetry element can be animated by pressing a button that transposes the positions of atoms over a second or two.

I did experience a minor techical glitch on my Ubuntu Linux/Firefox 3 system in which the browser became unresponsive while loading the Jmol applet. After stopping and restarting, the site worked flawlessly.

S@O is an excellent example of taking a subject that is very hard to learn from a book or in a lecture and making it much more comprehensible through the Web. For anyone learning symmetry or just a bit rusty, Symmetry@Otterbein makes an excellent resource.

Kudos

  • Very well-thought and clean design.
  • Many excellent examples.
  • Interactive point group flowchart.
  • Animated symmetry operations.
  • Many useful links to symmetry resources.

Ideas for Improvement

Not easy to come by, so here's one that's probably a stretch:

  • Submit any structure and interactively find its point group and symmetry elements.

Comments

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